Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | CD58_RS19980 | Not Available | Negative | 4733135 - 4733704 | 20850.1 |
| sdr family oxidoreductase | CD58_RS19985 | Not Available | Positive | 4733794 - 4734522 | 26815.9 |
| 2-hydroxychromene-2-carboxylate isomerase | CD58_RS19990 | Not Available | Positive | 4734556 - 4735146 | 21801.3 |
| aminopeptidase p family protein | CD58_RS19995 | Not Available | Negative | 4735156 - 4736964 | 66013.6 |
| cysteine desulfurase family protein | CD58_RS20000 | Not Available | Negative | 4737015 - 4738181 | 41119.0 |
| lyse family translocator | CD58_RS20005 | Not Available | Negative | 4738340 - 4738954 | 22324.8 |
| hypothetical protein | CD58_RS20010 | Not Available | Negative | 4739057 - 4739323 | 9610.38 |
| antibiotic biosynthesis monooxygenase | CD58_RS20015 | Not Available | Negative | 4739440 - 4739805 | 13889.2 |
| redox-sensitive transcriptional activator soxr | CD58_RS20020 | Not Available | Positive | 4739903 - 4740373 | 17120.8 |
| voc family protein | CD58_RS20025 | Not Available | Positive | 4740460 - 4740921 | 16806.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
