Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS19930 | Not Available | Positive | 4724008 - 4724301 | 9965.45 |
| srpbcc family protein | CD58_RS19935 | Not Available | Negative | 4724788 - 4725246 | 17663.8 |
| lysozyme inhibitor lpri family protein | CD58_RS19940 | Not Available | Positive | 4725370 - 4725771 | 14525.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4725885 - 4726000 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4726168 - 4729059 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4729308 - 4729383 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4729414 - 4729490 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4729572 - 4731108 | Not Available |
| threonine/homoserine exporter rhta | CD58_RS19970 | Not Available | Positive | 4731790 - 4732677 | 30521.6 |
| hypothetical protein | CD58_RS19975 | Not Available | Positive | 4732846 - 4733127 | 9675.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
