Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | CD58_RS19880 | Not Available | Positive | 4714874 - 4715674 | 27931.1 |
| glycoside hydrolase family 15 protein | CD58_RS19885 | Not Available | Positive | 4715667 - 4717490 | 68970.7 |
| duf6124 family protein | CD58_RS19890 | Not Available | Negative | 4717623 - 4717979 | 12694.1 |
| hypothetical protein | CD58_RS19895 | Not Available | Positive | 4718542 - 4718919 | 14190.2 |
| alpha/beta fold hydrolase | CD58_RS19900 | Not Available | Positive | 4718948 - 4719850 | 33810.2 |
| glxa family transcriptional regulator | CD58_RS19905 | Not Available | Negative | 4719819 - 4720811 | 35398.5 |
| isonitrile hydratase | CD58_RS19910 | Not Available | Positive | 4720910 - 4721596 | 24363.4 |
| atu4866 domain-containing protein | CD58_RS19915 | Not Available | Negative | 4721658 - 4721915 | 9914.4 |
| sdr family oxidoreductase | CD58_RS19920 | Not Available | Negative | 4721943 - 4722680 | 26208.6 |
| arac family transcriptional regulator | CD58_RS19925 | Not Available | Positive | 4722883 - 4723830 | 35082.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
