Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme family protein | CD58_RS19830 | Not Available | Positive | 4671967 - 4672842 | 31979.4 |
| cyclic peptide export abc transporter | CD58_RS19835 | Not Available | Positive | 4673191 - 4674849 | 60918.8 |
| metal abc transporter atp-binding protein | CD58_RS19840 | Not Available | Positive | 4674887 - 4679028 | 145561.0 |
| tonb-dependent siderophore receptor | CD58_RS19845 | Not Available | Negative | 4679233 - 4681698 | 89683.9 |
| non-ribosomal peptide synthetase | CD58_RS19850 | Not Available | Negative | 4682226 - 4685453 | 116363.0 |
| non-ribosomal peptide synthase/polyketide synthase | CD58_RS19855 | Not Available | Negative | 4685450 - 4698997 | 500241.0 |
| metal abc transporter atp-binding protein | CD58_RS19860 | Not Available | Negative | 4698997 - 4711565 | 449026.0 |
| thioesterase ii family protein | CD58_RS19865 | Not Available | Negative | 4711835 - 4712569 | 27072.9 |
| trans-aconitate 2-methyltransferase | CD58_RS19870 | Not Available | Positive | 4712715 - 4713485 | 28366.7 |
| cupin-like domain-containing protein | CD58_RS19875 | Not Available | Positive | 4713568 - 4714701 | 41886.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
