Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor family transcriptional regulator | CD58_RS19730 | Not Available | Negative | 4643931 - 4644956 | 35785.3 |
| mfs transporter | CD58_RS19735 | Not Available | Positive | 4645140 - 4646291 | 38815.9 |
| tonb-dependent siderophore receptor | CD58_RS19740 | Not Available | Negative | 4646509 - 4648944 | 88698.7 |
| fecr family protein | CD58_RS19745 | Not Available | Negative | 4649043 - 4650026 | 35921.6 |
| sigma-70 family rna polymerase sigma factor | CD58_RS19750 | Not Available | Negative | 4650064 - 4650564 | 19179.7 |
| carboxymuconolactone decarboxylase family protein | CD58_RS19755 | Not Available | Negative | 4650826 - 4651266 | 16534.8 |
| mechanosensitive ion channel family protein | CD58_RS19760 | Not Available | Negative | 4651574 - 4653016 | 52501.1 |
| pirin family protein | CD58_RS19765 | Not Available | Negative | 4653225 - 4654091 | 31631.4 |
| response regulator transcription factor | CD58_RS19770 | Not Available | Negative | 4654318 - 4654932 | 22988.2 |
| response regulator | CD58_RS19775 | Not Available | Negative | 4655048 - 4655482 | 15965.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
