Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleobase:cation symporter-2 family protein | CD58_RS19680 | Not Available | Negative | 4632739 - 4634259 | 52540.0 |
| arylamine n-acetyltransferase family protein | CD58_RS19685 | Not Available | Negative | 4634394 - 4635218 | 31354.6 |
| exodeoxyribonuclease iii | CD58_RS19690 | Not Available | Negative | 4635332 - 4636126 | 30238.7 |
| eal domain-containing protein | CD58_RS19695 | Not Available | Negative | 4636197 - 4638773 | 95588.6 |
| diguanylate cyclase | CD58_RS19700 | Not Available | Negative | 4638887 - 4640458 | 58262.7 |
| chromate efflux transporter | CD58_RS19705 | Not Available | Positive | 4640758 - 4642116 | 48955.3 |
| arsenic resistance n-acetyltransferase arsn2 | CD58_RS19710 | Not Available | Negative | 4642113 - 4642544 | 15238.3 |
| type ii toxin-antitoxin system rele/pare family toxin | CD58_RS19715 | Not Available | Positive | 4642720 - 4642986 | 9969.12 |
| helix-turn-helix domain-containing protein | CD58_RS19720 | Not Available | Positive | 4642989 - 4643276 | 10812.0 |
| hypothetical protein | CD58_RS19725 | Not Available | Positive | 4643410 - 4643898 | 18204.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
