Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS31275 | Not Available | Positive | 4624739 - 4624900 | 5974.43 |
| terc family protein | CD58_RS19635 | Not Available | Negative | 4624974 - 4625723 | 26931.2 |
| hypothetical protein | CD58_RS19640 | Not Available | Negative | 4625751 - 4626002 | 8700.28 |
| transcriptional activator nhar | CD58_RS19645 | Not Available | Positive | 4626143 - 4627039 | 33501.4 |
| mfs transporter | CD58_RS19650 | Not Available | Negative | 4627036 - 4628193 | 40473.1 |
| serine/threonine transporter sstt | CD58_RS19655 | Not Available | Positive | 4628480 - 4629712 | 42583.3 |
| duf1993 family protein | CD58_RS19660 | Not Available | Negative | 4629928 - 4630437 | 18730.6 |
| yceh family protein | CD58_RS19665 | Not Available | Positive | 4630569 - 4631216 | 24041.1 |
| shikimate 5-dehydrogenase | CD58_RS19670 | Not Available | Negative | 4631224 - 4632042 | 29128.0 |
| hypothetical protein | CD58_RS19675 | Not Available | Positive | 4632301 - 4632651 | 12872.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
