Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CD58_RS01480 | Not Available | Negative | 348788 - 349483 | 25058.8 |
| abc transporter substrate-binding protein | CD58_RS01485 | Not Available | Negative | 349562 - 350317 | 27865.2 |
| abc transporter atp-binding protein | CD58_RS01490 | Not Available | Negative | 350331 - 351104 | 28109.0 |
| hypothetical protein | CD58_RS01495 | Not Available | Positive | 351500 - 351949 | 15962.1 |
| hypothetical protein | CD58_RS01500 | Not Available | Negative | 351959 - 352405 | 16898.3 |
| atp-binding protein | CD58_RS01505 | Not Available | Negative | 352449 - 354683 | 82479.8 |
| biliverdin-producing heme oxygenase | CD58_RS01510 | Not Available | Negative | 354680 - 355285 | 22366.0 |
| yhcg family protein | CD58_RS01515 | Not Available | Negative | 355360 - 356406 | 40295.5 |
| hypothetical protein | CD58_RS01520 | Not Available | Negative | 356630 - 357037 | 15148.8 |
| dhcw motif cupin fold protein | CD58_RS01525 | Not Available | Negative | 357104 - 357433 | 12268.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
