Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpx | CD58_RS19585 | Not Available | Negative | 4616676 - 4617959 | 47071.4 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | CD58_RS19590 | Not Available | Negative | 4618067 - 4618708 | 23460.2 |
| trigger factor | CD58_RS19595 | Not Available | Negative | 4618802 - 4620112 | 48562.7 |
| Trna-leu | Not Available | Not Available | Positive | 4620529 - 4620613 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 4620672 - 4620747 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4620788 - 4620864 | Not Available |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | CD58_RS19615 | Not Available | Positive | 4621146 - 4622000 | 30563.0 |
| d-alanyl-d-alanine endopeptidase | CD58_RS19620 | Not Available | Positive | 4622344 - 4623282 | 34031.3 |
| duf6021 family protein | CD58_RS19625 | Not Available | Negative | 4623533 - 4623736 | 7057.92 |
| hypothetical protein | CD58_RS19630 | Not Available | Negative | 4623837 - 4624514 | 24184.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
