Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | CD58_RS19540 | Not Available | Negative | 4601694 - 4602602 | 32513.1 |
| fad-dependent oxidoreductase | CD58_RS19545 | Not Available | Negative | 4604402 - 4606441 | 73202.0 |
| duf3422 domain-containing protein | CD58_RS19550 | Not Available | Positive | 4606681 - 4607898 | 45591.4 |
| carbon-nitrogen hydrolase family protein | CD58_RS19555 | Not Available | Positive | 4608069 - 4609199 | 41486.4 |
| arac family transcriptional regulator | CD58_RS19560 | Not Available | Positive | 4609202 - 4610239 | 38952.6 |
| duf2242 domain-containing protein | CD58_RS19565 | Not Available | Negative | 4610562 - 4611374 | 28128.1 |
| sura n-terminal domain-containing protein | CD58_RS19570 | Not Available | Negative | 4611602 - 4613473 | 68618.4 |
| Trna-pseudo | Not Available | Not Available | Positive | 4613576 - 4613650 | Not Available |
| hu family dna-binding protein | CD58_RS19575 | Not Available | Negative | 4613698 - 4613970 | 9106.01 |
| endopeptidase la | CD58_RS19580 | Not Available | Negative | 4614119 - 4616515 | 88787.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
