Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CD58_RS19490 | Not Available | Positive | 4591551 - 4592420 | 31672.0 |
| abc transporter permease | CD58_RS19495 | Not Available | Positive | 4592427 - 4593221 | 28610.9 |
| (2fe-2s)-binding protein | CD58_RS19500 | Not Available | Positive | 4593229 - 4593519 | 10361.5 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS19505 | Not Available | Positive | 4593686 - 4595041 | 48427.2 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS19510 | Not Available | Positive | 4595038 - 4596153 | 39035.4 |
| abc transporter substrate-binding protein | CD58_RS19515 | Not Available | Positive | 4596171 - 4597232 | 38358.2 |
| leucine-rich repeat-containing protein kinase family protein | CD58_RS19520 | Not Available | Positive | 4597327 - 4598673 | 48649.9 |
| yebc/pmpr family dna-binding transcriptional regulator | CD58_RS19525 | Not Available | Negative | 4598677 - 4599381 | 25110.7 |
| type vi secretion system vgr family protein | CD58_RS19530 | Not Available | Positive | 4599601 - 4601007 | 52202.0 |
| cytochrome b | CD58_RS19535 | Not Available | Positive | 4601138 - 4601686 | 20819.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
