Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | CD58_RS19440 | Not Available | Positive | 4581373 - 4583322 | 70233.0 |
| lexa family protein | CD58_RS19445 | Not Available | Negative | 4583352 - 4583999 | 24320.4 |
| duf6124 family protein | CD58_RS19450 | Not Available | Positive | 4584129 - 4584470 | 12549.6 |
| m14-type cytosolic carboxypeptidase | CD58_RS19455 | Not Available | Positive | 4584974 - 4586125 | 43630.2 |
| cytochrome b | CD58_RS19460 | Not Available | Negative | 4586280 - 4586816 | 19641.1 |
| catalase family peroxidase | CD58_RS19465 | Not Available | Negative | 4586813 - 4587892 | 38448.5 |
| sigma-70 family rna polymerase sigma factor | CD58_RS19470 | Not Available | Positive | 4588059 - 4588565 | 19484.3 |
| anti-sigma factor family protein | CD58_RS19475 | Not Available | Positive | 4588562 - 4589314 | 27722.9 |
| iclr family transcriptional regulator | CD58_RS19480 | Not Available | Negative | 4589449 - 4590285 | 30321.6 |
| abc transporter atp-binding protein | CD58_RS19485 | Not Available | Positive | 4590529 - 4591554 | 37155.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
