Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine n-succinyltransferase | CD58_RS19390 | Not Available | Positive | 4568912 - 4569946 | 38050.8 |
| oxaloacetate decarboxylase | CD58_RS19395 | Not Available | Positive | 4570104 - 4570973 | 31755.1 |
| acyl-coa dehydrogenase | CD58_RS19400 | Not Available | Negative | 4571240 - 4572469 | 45339.9 |
| lysr family transcriptional regulator | CD58_RS19405 | Not Available | Positive | 4572647 - 4573576 | 35142.9 |
| merr family transcriptional regulator | CD58_RS19410 | Not Available | Positive | 4573772 - 4574173 | 15470.5 |
| hydroxymethylglutaryl-coa lyase | CD58_RS19415 | Not Available | Positive | 4574323 - 4575222 | 31323.5 |
| amp-binding protein | CD58_RS19420 | Not Available | Negative | 4575876 - 4577573 | 62284.8 |
| isovaleryl-coa dehydrogenase | CD58_RS19425 | Not Available | Positive | 4577762 - 4578925 | 42460.9 |
| carboxyl transferase domain-containing protein | CD58_RS19430 | Not Available | Positive | 4578937 - 4580544 | 57652.3 |
| gamma-carboxygeranoyl-coa hydratase | CD58_RS19435 | Not Available | Positive | 4580558 - 4581373 | 29831.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
