Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator ftra | CD58_RS19340 | Not Available | Positive | 4558433 - 4559392 | 34928.8 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS19345 | Not Available | Positive | 4559627 - 4560949 | 46970.2 |
| precorrin-6a synthase (deacetylating) | CD58_RS19350 | Not Available | Negative | 4561092 - 4561847 | 27769.2 |
| histidine phosphatase family protein | CD58_RS19355 | Not Available | Negative | 4561844 - 4562422 | 21572.8 |
| murr/rpir family transcriptional regulator | CD58_RS19360 | Not Available | Positive | 4562711 - 4563565 | 31925.5 |
| isochorismatase family cysteine hydrolase | CD58_RS19365 | Not Available | Positive | 4563568 - 4564212 | 24310.1 |
| glutamine synthetase family protein | CD58_RS19370 | Not Available | Positive | 4564209 - 4565561 | 48981.3 |
| n-formylglutamate amidohydrolase | CD58_RS19375 | Not Available | Positive | 4565545 - 4566297 | 27872.2 |
| apc family permease | CD58_RS19380 | Not Available | Positive | 4566374 - 4567723 | 48424.5 |
| arginine n-succinyltransferase | CD58_RS19385 | Not Available | Positive | 4567834 - 4568850 | 37269.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
