Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS19290 | Not Available | Positive | 4549035 - 4549319 | 10530.3 |
| nadph-dependent f420 reductase | CD58_RS19295 | Not Available | Negative | 4549356 - 4549958 | 20829.1 |
| lysr family transcriptional regulator | CD58_RS19300 | Not Available | Positive | 4550101 - 4551030 | 33546.8 |
| hypothetical protein | CD58_RS19305 | Not Available | Positive | 4551173 - 4551760 | 19451.4 |
| alpha/beta hydrolase | CD58_RS19310 | Not Available | Negative | 4551879 - 4552595 | 26281.3 |
| m14 family metallopeptidase | CD58_RS19315 | Not Available | Negative | 4552660 - 4553772 | 40610.4 |
| abc transporter substrate-binding protein | CD58_RS19320 | Not Available | Negative | 4553876 - 4554655 | 28141.0 |
| is256 family transposase | CD58_RS19325 | Not Available | Positive | 4555731 - 4556981 | 46841.4 |
| hypothetical protein | CD58_RS19330 | Not Available | Positive | 4557198 - 4557437 | 8682.44 |
| rhodanese-like domain-containing protein | CD58_RS19335 | Not Available | Negative | 4557897 - 4558331 | 15461.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
