Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS19240 | Not Available | Positive | 4538542 - 4538976 | 15564.3 |
| duf1615 domain-containing protein | CD58_RS19245 | Not Available | Negative | 4539217 - 4540311 | 39961.1 |
| porphobilinogen synthase | CD58_RS19250 | Not Available | Negative | 4540558 - 4541532 | 35390.3 |
| phzf family phenazine biosynthesis protein | CD58_RS19255 | Not Available | Negative | 4541647 - 4542504 | 30633.8 |
| glutathione binding-like protein | CD58_RS19260 | Not Available | Negative | 4542501 - 4543199 | 26304.7 |
| hypothetical protein | CD58_RS19265 | Not Available | Positive | 4543522 - 4544196 | 24730.2 |
| trna 2-selenouridine(34) synthase mnmh | CD58_RS19270 | Not Available | Negative | 4544322 - 4545425 | 41504.0 |
| selenide, water dikinase seld | CD58_RS19275 | Not Available | Negative | 4545425 - 4546459 | 36641.2 |
| nucleoside-specific channel-forming protein tsx | CD58_RS19280 | Not Available | Positive | 4546769 - 4547719 | 35072.4 |
| metal abc transporter atp-binding protein | CD58_RS19285 | Not Available | Positive | 4547762 - 4548786 | 36712.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
