Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mgtc/sapb family protein | CD58_RS19140 | Not Available | Negative | 4518029 - 4518529 | 17464.5 |
| duf3203 family protein | CD58_RS19145 | Not Available | Positive | 4518667 - 4518903 | 8225.48 |
| cytochrome c oxidase accessory protein ccog | CD58_RS19150 | Not Available | Positive | 4519111 - 4520523 | 52567.3 |
| gntr family transcriptional regulator mpar | CD58_RS19155 | Not Available | Positive | 4520594 - 4522021 | 53154.4 |
| hypothetical protein | CD58_RS30640 | Not Available | Positive | 4522132 - 4522551 | 15635.2 |
| sdr family oxidoreductase | CD58_RS19165 | Not Available | Negative | 4522705 - 4523451 | 26155.3 |
| dyp-type peroxidase | CD58_RS19170 | Not Available | Negative | 4523529 - 4524407 | 32063.1 |
| class c beta-lactamase | CD58_RS19175 | Not Available | Positive | 4524681 - 4525829 | 41339.3 |
| duf4174 domain-containing protein | CD58_RS19180 | Not Available | Negative | 4525974 - 4526522 | 18926.0 |
| sulfite exporter taue/safe family protein | CD58_RS19185 | Not Available | Negative | 4526791 - 4527576 | 27274.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
