Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa transferase subunit a | CD58_RS19090 | Not Available | Positive | 4502678 - 4503376 | 25185.3 |
| coa transferase subunit b | CD58_RS19095 | Not Available | Positive | 4503410 - 4504075 | 23455.7 |
| acetyl-coa c-acetyltransferase | CD58_RS19100 | Not Available | Positive | 4504087 - 4505268 | 40516.1 |
| fadr/gntr family transcriptional regulator | CD58_RS19110 | Not Available | Negative | 4505676 - 4506386 | 26011.2 |
| mfs transporter | CD58_RS19115 | Not Available | Positive | 4506723 - 4508069 | 48889.4 |
| glucarate dehydratase | CD58_RS19120 | Not Available | Positive | 4508098 - 4509441 | 48986.5 |
| 1,4-alpha-glucan branching protein glgb | CD58_RS19125 | Not Available | Negative | 4509713 - 4511947 | 83738.7 |
| maltose alpha-d-glucosyltransferase | CD58_RS19130 | Not Available | Negative | 4511959 - 4515303 | 125163.0 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | CD58_RS19135 | Not Available | Negative | 4515505 - 4517502 | 75297.9 |
| hypothetical protein | CD58_RS31270 | Not Available | Positive | 4517715 - 4517879 | 5801.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
