Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | CD58_RS19045 | Not Available | Positive | 4494276 - 4495694 | 51537.2 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS19050 | Not Available | Positive | 4495700 - 4496944 | 45005.5 |
| zip family metal transporter | CD58_RS19055 | Not Available | Negative | 4496990 - 4497919 | 32223.1 |
| manganese catalase family protein | CD58_RS19060 | Not Available | Negative | 4498023 - 4498904 | 31689.4 |
| metal abc transporter atp-binding protein | CD58_RS31510 | Not Available | Negative | 4499159 - 4499303 | 5278.33 |
| metal abc transporter atp-binding protein | CD58_RS31515 | Not Available | Negative | 4499306 - 4499536 | 7492.29 |
| metallothionein | CD58_RS19070 | Not Available | Negative | 4499931 - 4500179 | 8797.96 |
| hypothetical protein | CD58_RS19075 | Not Available | Negative | 4500214 - 4500486 | 9452.08 |
| nad-dependent protein deacetylase | CD58_RS19080 | Not Available | Positive | 4500653 - 4501492 | 31226.4 |
| lysr family transcriptional regulator | CD58_RS19085 | Not Available | Negative | 4501609 - 4502511 | 32978.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
