Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | CD58_RS18995 | Not Available | Negative | 4484530 - 4484937 | 14779.7 |
| dna topoisomerase iii | CD58_RS19000 | Not Available | Positive | 4485179 - 4487125 | 70987.6 |
| hypothetical protein | CD58_RS19005 | Not Available | Positive | 4487808 - 4488137 | 12611.1 |
| glutaminase b | CD58_RS19010 | Not Available | Negative | 4488355 - 4489263 | 32615.1 |
| hypothetical protein | CD58_RS19015 | Not Available | Positive | 4489417 - 4489611 | 7711.1 |
| hypothetical protein | CD58_RS19020 | Not Available | Negative | 4489622 - 4490641 | 37070.3 |
| amino acid abc transporter permease | CD58_RS19025 | Not Available | Negative | 4490849 - 4491496 | 23379.3 |
| amino acid abc transporter permease | CD58_RS19030 | Not Available | Negative | 4491498 - 4492178 | 24539.8 |
| amino acid abc transporter atp-binding protein | CD58_RS19035 | Not Available | Negative | 4492182 - 4492958 | 28791.2 |
| substrate-binding periplasmic protein | CD58_RS19040 | Not Available | Negative | 4493013 - 4493978 | 35200.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
