Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| error-prone dna polymerase | CD58_RS18945 | Not Available | Negative | 4469853 - 4472930 | 115263.0 |
| y-family dna polymerase | CD58_RS18950 | Not Available | Negative | 4472927 - 4474348 | 53372.0 |
| translesion dna synthesis-associated protein imua | CD58_RS18955 | Not Available | Negative | 4474356 - 4474988 | 22251.7 |
| transcriptional repressor lexa | CD58_RS18960 | Not Available | Negative | 4474988 - 4475605 | 22400.3 |
| lysr family transcriptional regulator | CD58_RS18965 | Not Available | Negative | 4475816 - 4476700 | 33225.3 |
| gmc family oxidoreductase | CD58_RS18970 | Not Available | Positive | 4476832 - 4478475 | 59893.6 |
| mfs transporter | CD58_RS18975 | Not Available | Positive | 4478680 - 4480302 | 58857.7 |
| tonb-dependent siderophore receptor | CD58_RS18980 | Not Available | Negative | 4480358 - 4482835 | 89638.2 |
| fecr domain-containing protein | CD58_RS18985 | Not Available | Negative | 4482935 - 4483897 | 35126.8 |
| sigma-70 family rna polymerase sigma factor | CD58_RS18990 | Not Available | Negative | 4483894 - 4484415 | 19701.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
