Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf934 domain-containing protein | CD58_RS18895 | Not Available | Positive | 4460073 - 4460567 | 18771.0 |
| protease sohb | CD58_RS18900 | Not Available | Negative | 4460782 - 4461813 | 38237.3 |
| histidine phosphatase family protein | CD58_RS18905 | Not Available | Positive | 4462078 - 4462788 | 26015.2 |
| scp2 sterol-binding domain-containing protein | CD58_RS18910 | Not Available | Positive | 4462840 - 4463154 | 11068.3 |
| hydrogenase maturation protein | CD58_RS18915 | Not Available | Positive | 4463374 - 4465092 | 63548.3 |
| lysr family transcriptional regulator | CD58_RS18920 | Not Available | Positive | 4465156 - 4466019 | 32493.1 |
| duf465 domain-containing protein | CD58_RS18925 | Not Available | Negative | 4466078 - 4466317 | 9000.78 |
| duf4142 domain-containing protein | CD58_RS18930 | Not Available | Positive | 4466535 - 4467056 | 18781.3 |
| hypothetical protein | CD58_RS18935 | Not Available | Negative | 4467105 - 4467386 | 9848.61 |
| pas domain-containing sensor histidine kinase | CD58_RS18940 | Not Available | Negative | 4467483 - 4469594 | 77277.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
