Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-activating lysine-acyltransferase | CD58_RS18845 | Not Available | Negative | 4447297 - 4447767 | 18171.9 |
| cbtb-domain containing protein | CD58_RS18850 | Not Available | Positive | 4448308 - 4448496 | 6448.54 |
| cbta family protein | CD58_RS18855 | Not Available | Positive | 4448508 - 4449203 | 24741.2 |
| cobalamin biosynthesis protein | CD58_RS18860 | Not Available | Positive | 4449200 - 4449604 | 14152.3 |
| precorrin-4 c(11)-methyltransferase | CD58_RS18865 | Not Available | Positive | 4449681 - 4450427 | 26661.4 |
| fe-s biogenesis protein nfua | CD58_RS18870 | Not Available | Negative | 4450673 - 4451257 | 21036.8 |
| fatty acid cis/trans isomerase | CD58_RS18875 | Not Available | Negative | 4451375 - 4453663 | 86153.6 |
| methionine synthase | CD58_RS18880 | Not Available | Positive | 4453822 - 4457532 | 135645.0 |
| duf2970 domain-containing protein | CD58_RS18885 | Not Available | Positive | 4457667 - 4457885 | 7844.75 |
| nitrite/sulfite reductase | CD58_RS18890 | Not Available | Positive | 4458431 - 4460089 | 62378.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
