Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | CD58_RS18795 | Not Available | Negative | 4433486 - 4434277 | 29314.8 |
| amino acid abc transporter permease | CD58_RS18800 | Not Available | Negative | 4434274 - 4434936 | 24364.4 |
| amino acid abc transporter permease | CD58_RS18805 | Not Available | Negative | 4434946 - 4435608 | 24358.6 |
| transporter substrate-binding domain-containing protein | CD58_RS18810 | Not Available | Negative | 4435663 - 4436511 | 30882.7 |
| hypothetical protein | CD58_RS18815 | Not Available | Negative | 4436896 - 4437237 | 11431.9 |
| phospholipase d-like domain-containing protein | CD58_RS18820 | Not Available | Negative | 4437293 - 4438939 | 61262.4 |
| vwa domain-containing protein | CD58_RS18825 | Not Available | Negative | 4439139 - 4439744 | 22249.7 |
| atp-binding protein | CD58_RS18830 | Not Available | Negative | 4439798 - 4440799 | 35661.3 |
| metal abc transporter atp-binding protein | CD58_RS18835 | Not Available | Negative | 4440974 - 4444746 | 136158.0 |
| cobalamin biosynthesis protein cobw | CD58_RS18840 | Not Available | Negative | 4444750 - 4445814 | 38477.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
