Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntp family permease | CD58_RS18745 | Not Available | Positive | 4421055 - 4422446 | 48975.2 |
| 3-hydroxybutyrate dehydrogenase | CD58_RS18750 | Not Available | Positive | 4422454 - 4423230 | 26777.1 |
| acetoacetate--coa ligase | CD58_RS18755 | Not Available | Positive | 4423406 - 4425361 | 71684.7 |
| pilt/pilu family type 4a pilus atpase | CD58_RS18760 | Not Available | Negative | 4425513 - 4426628 | 41190.6 |
| pas domain-containing protein | CD58_RS18765 | Not Available | Positive | 4426761 - 4429298 | 93853.7 |
| peptidylprolyl isomerase | CD58_RS18770 | Not Available | Positive | 4429344 - 4429619 | 10109.5 |
| sugar kinase | CD58_RS18775 | Not Available | Negative | 4429772 - 4430695 | 33168.5 |
| amino acid deaminase | CD58_RS18780 | Not Available | Negative | 4430851 - 4432068 | 43262.1 |
| iclr family transcriptional regulator | CD58_RS18785 | Not Available | Negative | 4432110 - 4432874 | 28558.1 |
| rida family protein | CD58_RS18790 | Not Available | Negative | 4433074 - 4433460 | 14066.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
