Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | CD58_RS18695 | Not Available | Positive | 4410337 - 4410669 | 11722.8 |
| extracellular solute-binding protein | CD58_RS18700 | Not Available | Positive | 4410797 - 4412665 | 69988.8 |
| microcin c abc transporter permease yejb | CD58_RS18705 | Not Available | Positive | 4412665 - 4413723 | 38629.8 |
| abc transporter permease | CD58_RS18710 | Not Available | Positive | 4413723 - 4414745 | 37875.4 |
| abc transporter atp-binding protein | CD58_RS18715 | Not Available | Positive | 4414772 - 4416346 | 57962.4 |
| class i sam-dependent methyltransferase | CD58_RS18720 | Not Available | Negative | 4416351 - 4417214 | 30095.8 |
| antibiotic biosynthesis monooxygenase family protein | CD58_RS18725 | Not Available | Negative | 4417241 - 4417621 | 13665.7 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS18730 | Not Available | Negative | 4417678 - 4418571 | 31968.9 |
| tetr/acrr family transcriptional regulator | CD58_RS18735 | Not Available | Positive | 4418679 - 4419341 | 23658.3 |
| sigma-54 interaction domain-containing protein | CD58_RS18740 | Not Available | Positive | 4419338 - 4420744 | 51533.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
