Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| azlc family abc transporter permease | CD58_RS01405 | Not Available | Positive | 329187 - 329900 | 25199.3 |
| azld domain-containing protein | CD58_RS01410 | Not Available | Positive | 329879 - 330196 | 11611.6 |
| lysr family transcriptional regulator | CD58_RS01415 | Not Available | Negative | 330113 - 331039 | 34485.2 |
| mbca/pars/xre antitoxin family protein | CD58_RS01420 | Not Available | Positive | 331389 - 331799 | 15350.5 |
| res family nad+ phosphorylase | CD58_RS01425 | Not Available | Positive | 331799 - 332476 | 25259.9 |
| methyl-accepting chemotaxis protein | CD58_RS01430 | Not Available | Negative | 332545 - 334152 | 57571.2 |
| metal abc transporter atp-binding protein | CD58_RS28875 | Not Available | Negative | 334405 - 334682 | 10250.6 |
| dihydrofolate reductase family protein | CD58_RS01435 | Not Available | Positive | 335062 - 335598 | 19695.5 |
| hypothetical protein | CD58_RS01440 | Not Available | Negative | 336053 - 336994 | 35504.1 |
| hypothetical protein | CD58_RS01445 | Not Available | Negative | 336995 - 339025 | 75708.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
