Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS31505 | Not Available | Negative | 4386540 - 4386995 | 16786.4 |
| hepn/toprim-associated domain-containing protein | CD58_RS18605 | Not Available | Negative | 4387454 - 4388746 | 48470.9 |
| uvrd-helicase domain-containing protein | CD58_RS18610 | Not Available | Negative | 4388995 - 4390710 | 62648.7 |
| atp-dependent nuclease | CD58_RS18615 | Not Available | Negative | 4390703 - 4392595 | 70132.7 |
| hypothetical protein | CD58_RS18620 | Not Available | Positive | 4393169 - 4394071 | 33905.2 |
| hypothetical protein | CD58_RS18625 | Not Available | Negative | 4394339 - 4394644 | 11329.7 |
| aaa family atpase | CD58_RS18630 | Not Available | Negative | 4394901 - 4397528 | 97725.2 |
| hypothetical protein | CD58_RS18635 | Not Available | Positive | 4397861 - 4398490 | 24395.9 |
| lysr substrate-binding domain-containing protein | CD58_RS18640 | Not Available | Positive | 4398907 - 4399278 | 13747.5 |
| tyrosine-type recombinase/integrase | CD58_RS18645 | Not Available | Negative | 4399632 - 4401473 | 69249.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
