Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrating conjugative element protein | CD58_RS18550 | Not Available | Positive | 4377051 - 4378433 | 48458.5 |
| hypothetical protein | CD58_RS18555 | Not Available | Positive | 4378437 - 4378745 | 11819.9 |
| conjugal transfer protein trag n-terminal domain-containing protein | CD58_RS18560 | Not Available | Positive | 4378756 - 4380294 | 56336.6 |
| duf3742 family protein | CD58_RS18565 | Not Available | Negative | 4380287 - 4380697 | 14637.9 |
| hypothetical protein | CD58_RS18570 | Not Available | Positive | 4381149 - 4381478 | 11952.3 |
| ardc family protein | CD58_RS18575 | Not Available | Positive | 4381609 - 4382571 | 35849.1 |
| hypothetical protein | CD58_RS18580 | Not Available | Negative | 4382704 - 4382898 | 7108.67 |
| mobh family relaxase | CD58_RS18585 | Not Available | Positive | 4383130 - 4384854 | 64197.4 |
| hypothetical protein | CD58_RS18590 | Not Available | Negative | 4384887 - 4385579 | 25514.3 |
| 30s ribosomal protein s6 modification protein rimk | CD58_RS18595 | Not Available | Negative | 4385572 - 4386525 | 36080.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
