Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pfl_4703 family integrating conjugative element protein | CD58_RS18505 | Not Available | Positive | 4368027 - 4368668 | 24639.4 |
| tigr03749 family integrating conjugative element protein | CD58_RS18510 | Not Available | Positive | 4368665 - 4369477 | 29210.6 |
| tigr03752 family integrating conjugative element protein | CD58_RS18515 | Not Available | Positive | 4369467 - 4370984 | 53493.9 |
| tigr03751 family conjugal transfer lipoprotein | CD58_RS18520 | Not Available | Positive | 4370947 - 4371363 | 15653.6 |
| conjugative transfer atpase | CD58_RS18525 | Not Available | Positive | 4371363 - 4374110 | 103260.0 |
| zeta toxin family protein | CD58_RS18530 | Not Available | Negative | 4374135 - 4374881 | 27560.9 |
| hypothetical protein | CD58_RS18535 | Not Available | Negative | 4374878 - 4375126 | 8754.85 |
| lasr-specific antiactivator qsla | CD58_RS29405 | Not Available | Negative | 4375312 - 4375569 | 9321.98 |
| helix-turn-helix domain-containing protein | CD58_RS18540 | Not Available | Positive | 4375728 - 4375982 | 9624.75 |
| tigr03756 family integrating conjugative element protein | CD58_RS18545 | Not Available | Positive | 4376098 - 4377054 | 34495.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
