Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iii | CD58_RS18405 | Not Available | Positive | 4351503 - 4353473 | 72375.2 |
| hypothetical protein | CD58_RS18410 | Not Available | Negative | 4353519 - 4353776 | 9995.0 |
| helix-turn-helix domain-containing protein | CD58_RS18415 | Not Available | Positive | 4353986 - 4354327 | 12560.2 |
| sty4534 family ice replication protein | CD58_RS18420 | Not Available | Positive | 4355226 - 4355807 | 21299.9 |
| hypothetical protein | CD58_RS18425 | Not Available | Positive | 4355879 - 4356136 | 9790.59 |
| radc family protein | CD58_RS18430 | Not Available | Positive | 4356236 - 4356730 | 18209.8 |
| hypothetical protein | CD58_RS18435 | Not Available | Positive | 4356786 - 4357550 | 28286.1 |
| pill n-terminal domain-containing protein | CD58_RS18440 | Not Available | Positive | 4357640 - 4358182 | 19840.8 |
| chemotaxis protein | CD58_RS18445 | Not Available | Positive | 4358179 - 4358850 | 24520.3 |
| tigr03759 family integrating conjugative element protein | CD58_RS18450 | Not Available | Positive | 4358860 - 4359579 | 26560.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
