Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS18355 | Not Available | Positive | 4343838 - 4344587 | 28347.1 |
| alpa family transcriptional regulator | CD58_RS18360 | Not Available | Positive | 4344699 - 4344929 | 8891.64 |
| para family protein | CD58_RS18365 | Not Available | Positive | 4344934 - 4345776 | 30716.6 |
| hypothetical protein | CD58_RS18370 | Not Available | Positive | 4345861 - 4346070 | 7780.41 |
| parb family protein | CD58_RS18375 | Not Available | Positive | 4346085 - 4347668 | 59244.1 |
| duf2857 domain-containing protein | CD58_RS18380 | Not Available | Positive | 4347665 - 4348213 | 21058.4 |
| sty4528 family pathogenicity island replication protein | CD58_RS18385 | Not Available | Positive | 4348210 - 4349397 | 43936.2 |
| pfl_4669 family integrating conjugative element protein | CD58_RS18390 | Not Available | Positive | 4349542 - 4350297 | 27720.9 |
| duf3158 family protein | CD58_RS18395 | Not Available | Positive | 4350294 - 4350812 | 19390.7 |
| single-stranded dna-binding protein | CD58_RS18400 | Not Available | Positive | 4350809 - 4351279 | 17742.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
