Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | CD58_RS18300 | Not Available | Positive | 4331971 - 4332522 | 20434.7 |
| glxa family transcriptional regulator | CD58_RS18305 | Not Available | Negative | 4332537 - 4333565 | 37103.4 |
| mbl fold metallo-hydrolase | CD58_RS18310 | Not Available | Positive | 4333699 - 4334589 | 32257.4 |
| cysteine hydrolase family protein | CD58_RS18315 | Not Available | Positive | 4334687 - 4335232 | 19255.2 |
| iclr family transcriptional regulator | CD58_RS18320 | Not Available | Negative | 4335379 - 4336350 | 34894.0 |
| hlyd family secretion protein | CD58_RS18330 | Not Available | Positive | 4336459 - 4337340 | 32552.0 |
| fusc family protein | CD58_RS18335 | Not Available | Positive | 4337337 - 4339016 | 59753.8 |
| carboxymuconolactone decarboxylase family protein | CD58_RS18340 | Not Available | Positive | 4339069 - 4339398 | 11524.7 |
| glxa family transcriptional regulator | CD58_RS18345 | Not Available | Positive | 4339885 - 4340847 | 35786.9 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | CD58_RS18350 | Not Available | Positive | 4341872 - 4343149 | 45873.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
