Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | CD58_RS18260 | Not Available | Negative | 4321386 - 4321949 | 20675.9 |
| amino acid permease | CD58_RS18265 | Not Available | Negative | 4322057 - 4323541 | 53532.6 |
| cystathionine beta-lyase | CD58_RS18270 | Not Available | Positive | 4323918 - 4325108 | 43571.9 |
| aec family transporter | CD58_RS18275 | Not Available | Negative | 4325407 - 4326333 | 32469.0 |
| lysr family transcriptional regulator | CD58_RS18280 | Not Available | Negative | 4326517 - 4327401 | 32192.2 |
| duf2946 domain-containing protein | CD58_RS18285 | Not Available | Positive | 4327577 - 4327966 | 14160.5 |
| tonb-dependent receptor | CD58_RS18290 | Not Available | Positive | 4328073 - 4330154 | 78290.7 |
| metal abc transporter atp-binding protein | CD58_RS31500 | Not Available | Negative | 4330190 - 4330339 | 5467.42 |
| metal abc transporter atp-binding protein | CD58_RS18295 | Not Available | Positive | 4330342 - 4331657 | 49184.6 |
| metal abc transporter atp-binding protein | CD58_RS29395 | Not Available | Negative | 4331838 - 4331972 | 4974.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
