Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CD58_RS18215 | Not Available | Positive | 4312222 - 4312941 | 26179.7 |
| abc transporter permease | CD58_RS18220 | Not Available | Positive | 4312938 - 4313648 | 26705.8 |
| abc transporter atp-binding protein | CD58_RS18225 | Not Available | Positive | 4313665 - 4314429 | 28299.4 |
| urocanate hydratase | CD58_RS18230 | Not Available | Positive | 4314803 - 4316494 | 61455.3 |
| histidine ammonia-lyase | CD58_RS18235 | Not Available | Positive | 4316491 - 4318023 | 53909.1 |
| carboxymuconolactone decarboxylase family protein | CD58_RS18240 | Not Available | Positive | 4318497 - 4318829 | 11673.9 |
| thioredoxin family protein | CD58_RS18245 | Not Available | Negative | 4319200 - 4319424 | 7951.88 |
| hypothetical protein | CD58_RS31495 | Not Available | Positive | 4319326 - 4319604 | 10498.7 |
| dsba family oxidoreductase | CD58_RS18250 | Not Available | Negative | 4319601 - 4320296 | 25972.6 |
| osmc family protein | CD58_RS18255 | Not Available | Negative | 4320468 - 4321022 | 20263.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
