Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | CD58_RS18165 | Not Available | Positive | 4301297 - 4301872 | 20097.0 |
| duf2946 family protein | CD58_RS18170 | Not Available | Positive | 4301934 - 4302323 | 13547.9 |
| tonb-dependent receptor | CD58_RS18175 | Not Available | Positive | 4302395 - 4304545 | 79577.9 |
| methyl-accepting chemotaxis protein | CD58_RS18180 | Not Available | Negative | 4304756 - 4306702 | 69614.6 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS18185 | Not Available | Negative | 4306881 - 4308116 | 44905.1 |
| rida family protein | CD58_RS18190 | Not Available | Negative | 4308129 - 4308476 | 12628.1 |
| hypothetical protein | CD58_RS18195 | Not Available | Positive | 4308939 - 4309145 | 7792.28 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | CD58_RS18200 | Not Available | Positive | 4309142 - 4310278 | 41069.2 |
| histidine utilization repressor | CD58_RS18205 | Not Available | Positive | 4310278 - 4311015 | 27550.3 |
| transporter substrate-binding domain-containing protein | CD58_RS18210 | Not Available | Positive | 4311383 - 4312165 | 27915.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
