Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | CD58_RS01355 | Not Available | Negative | 317814 - 318713 | 32766.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | CD58_RS01360 | Not Available | Negative | 318710 - 319255 | 20188.9 |
| glucose-1-phosphate thymidylyltransferase rfba | CD58_RS01365 | Not Available | Negative | 319252 - 320127 | 32368.6 |
| dtdp-glucose 4,6-dehydratase | CD58_RS01370 | Not Available | Negative | 320124 - 321206 | 40254.5 |
| aminotransferase | CD58_RS01375 | Not Available | Positive | 321415 - 324327 | 106485.0 |
| agmatine deiminase | CD58_RS01380 | Not Available | Positive | 324581 - 325687 | 40685.8 |
| hypothetical protein | CD58_RS01385 | Not Available | Positive | 325930 - 326130 | 7525.03 |
| oprd family porin | CD58_RS01390 | Not Available | Positive | 326472 - 327758 | 46629.1 |
| 2og-fe dioxygenase family protein | CD58_RS01395 | Not Available | Positive | 327993 - 328739 | 28999.0 |
| gnat family n-acetyltransferase | CD58_RS01400 | Not Available | Positive | 328753 - 329190 | 16106.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
