Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CD58_RS18115 | Not Available | Positive | 4289689 - 4291053 | 49298.7 |
| oprd family porin | CD58_RS18120 | Not Available | Positive | 4291168 - 4292397 | 45195.0 |
| mfs transporter | CD58_RS18125 | Not Available | Positive | 4292447 - 4293808 | 48557.4 |
| polyamine abc transporter substrate-binding protein | CD58_RS18130 | Not Available | Negative | 4294271 - 4295356 | 39890.9 |
| cupin domain-containing protein | CD58_RS18135 | Not Available | Negative | 4295389 - 4295730 | 12585.0 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS18140 | Not Available | Negative | 4295727 - 4297151 | 52711.1 |
| helix-turn-helix domain-containing protein | CD58_RS18145 | Not Available | Negative | 4297209 - 4298009 | 30234.1 |
| dmt family transporter | CD58_RS18150 | Not Available | Negative | 4298114 - 4298944 | 28686.8 |
| tetr/acrr family transcriptional regulator | CD58_RS18155 | Not Available | Positive | 4299200 - 4299817 | 22862.7 |
| sulfite dehydrogenase | CD58_RS18160 | Not Available | Positive | 4300003 - 4301310 | 48074.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
