Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | CD58_RS18065 | Not Available | Positive | 4279680 - 4280066 | 14601.4 |
| mfs transporter | CD58_RS18070 | Not Available | Positive | 4280124 - 4281428 | 46886.2 |
| metal abc transporter atp-binding protein | CD58_RS30610 | Not Available | Positive | 4281441 - 4281560 | 4545.36 |
| res family nad+ phosphorylase | CD58_RS18080 | Not Available | Negative | 4282382 - 4282912 | 19338.0 |
| hypothetical protein | CD58_RS18085 | Not Available | Negative | 4282905 - 4283297 | 14125.8 |
| lysr family transcriptional regulator | CD58_RS18090 | Not Available | Negative | 4283708 - 4284640 | 35055.7 |
| dihydroxy-acid dehydratase | CD58_RS18095 | Not Available | Positive | 4284764 - 4286476 | 60182.9 |
| aconitase x | CD58_RS18100 | Not Available | Positive | 4286473 - 4287756 | 46443.2 |
| aconitase x swivel domain-containing protein | CD58_RS18105 | Not Available | Positive | 4287753 - 4288235 | 16951.4 |
| fad-dependent oxidoreductase | CD58_RS18110 | Not Available | Positive | 4288269 - 4289606 | 47839.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
