Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CD58_RS18015 | Not Available | Negative | 4269342 - 4270265 | 33388.9 |
| aspartate aminotransferase family protein | CD58_RS18020 | Not Available | Positive | 4271009 - 4272349 | 49430.1 |
| carbohydrate porin | CD58_RS18025 | Not Available | Negative | 4272966 - 4274267 | 47565.5 |
| indoleacetamide hydrolase | CD58_RS18030 | Not Available | Negative | 4274336 - 4275898 | 53716.0 |
| helix-turn-helix transcriptional regulator | CD58_RS18035 | Not Available | Negative | 4275947 - 4276666 | 27056.7 |
| hypothetical protein | CD58_RS18040 | Not Available | Negative | 4277040 - 4277444 | 14457.5 |
| metal abc transporter atp-binding protein | CD58_RS29390 | Not Available | Negative | 4277666 - 4277857 | 7459.09 |
| metal abc transporter atp-binding protein | CD58_RS18055 | Not Available | Negative | 4278153 - 4278627 | 16106.7 |
| metal abc transporter atp-binding protein | CD58_RS31490 | Not Available | Positive | 4278618 - 4278728 | 4016.72 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | CD58_RS18060 | Not Available | Positive | 4278779 - 4279636 | 31903.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
