Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family transposase | CD58_RS17970 | Not Available | Negative | 4258163 - 4259689 | 57002.4 |
| is66 family insertion sequence element accessory protein tnpb | CD58_RS31485 | Not Available | Negative | 4259771 - 4260106 | 12324.1 |
| is66-like element accessory protein tnpa | CD58_RS17980 | Not Available | Negative | 4260103 - 4260435 | 11991.5 |
| metal abc transporter atp-binding protein | CD58_RS17985 | Not Available | Negative | 4260652 - 4260948 | 11216.6 |
| mbl fold metallo-hydrolase | CD58_RS17990 | Not Available | Positive | 4261624 - 4262514 | 32492.8 |
| metal abc transporter atp-binding protein | CD58_RS30605 | Not Available | Positive | 4262604 - 4262678 | 2743.38 |
| 4-hydroxybenzoate 3-monooxygenase | CD58_RS17995 | Not Available | Negative | 4263201 - 4264385 | 44236.0 |
| hypothetical protein | CD58_RS18000 | Not Available | Negative | 4264517 - 4265857 | 48247.9 |
| apc family permease | CD58_RS18005 | Not Available | Positive | 4266273 - 4267682 | 49082.0 |
| aldehyde dehydrogenase family protein | CD58_RS18010 | Not Available | Positive | 4267807 - 4269279 | 53032.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
