Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS17885 | Not Available | Negative | 4242824 - 4243180 | 13225.0 |
| metal abc transporter atp-binding protein | CD58_RS17890 | Not Available | Negative | 4243218 - 4243576 | 12421.5 |
| metal abc transporter atp-binding protein | CD58_RS31685 | Not Available | Negative | 4243579 - 4243867 | 10470.8 |
| metal abc transporter atp-binding protein | CD58_RS31690 | Not Available | Positive | 4243882 - 4244001 | 4513.35 |
| methyl-accepting chemotaxis protein | CD58_RS17895 | Not Available | Positive | 4244318 - 4245847 | 55029.7 |
| periplasmic nitrate reductase, nape protein | CD58_RS17900 | Not Available | Positive | 4246098 - 4246265 | 6361.03 |
| chaperone napd | CD58_RS17905 | Not Available | Positive | 4246302 - 4246562 | 9504.53 |
| nitrate reductase catalytic subunit napa | CD58_RS17910 | Not Available | Positive | 4246559 - 4249063 | 93710.7 |
| nitrate reductase cytochrome c-type subunit | CD58_RS17915 | Not Available | Positive | 4249075 - 4249566 | 17982.4 |
| cytochrome c3 family protein | CD58_RS17920 | Not Available | Positive | 4249576 - 4250172 | 22640.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
