Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | CD58_RS31475 | Not Available | Positive | 4173054 - 4173152 | 3808.44 |
| hypothetical protein | CD58_RS17675 | Not Available | Positive | 4197318 - 4198733 | 51460.1 |
| hypothetical protein | CD58_RS17680 | Not Available | Negative | 4198748 - 4200721 | 75660.0 |
| hypothetical protein | CD58_RS17685 | Not Available | Positive | 4201078 - 4202943 | 70560.0 |
| hypothetical protein | CD58_RS17690 | Not Available | Negative | 4202991 - 4204226 | 47514.0 |
| nadh:flavorubredoxin reductase norw | CD58_RS17805 | Not Available | Negative | 4221953 - 4223086 | 41215.2 |
| anaerobic nitric oxide reductase flavorubredoxin | CD58_RS17810 | Not Available | Negative | 4223083 - 4224525 | 54268.0 |
| nitric oxide reductase transcriptional regulator norr | CD58_RS17815 | Not Available | Positive | 4224684 - 4226207 | 56070.7 |
| c-type cytochrome | CD58_RS17820 | Not Available | Positive | 4226972 - 4227286 | 10934.4 |
| nitrous oxide reductase accessory protein nosl | CD58_RS17825 | Not Available | Negative | 4227356 - 4227868 | 18829.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
