Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | CD58_RS17475 | Not Available | Negative | 4161805 - 4163286 | 53161.3 |
| uxaa family hydrolase | CD58_RS17480 | Not Available | Negative | 4163322 - 4164863 | 54771.8 |
| mfs transporter | CD58_RS17485 | Not Available | Negative | 4164942 - 4166324 | 49416.2 |
| lysr substrate-binding domain-containing protein | CD58_RS17490 | Not Available | Positive | 4166452 - 4167405 | 34880.6 |
| tartrate dehydrogenase | CD58_RS17495 | Not Available | Negative | 4167506 - 4168585 | 39316.9 |
| lysr substrate-binding domain-containing protein | CD58_RS17500 | Not Available | Positive | 4168694 - 4169605 | 33926.0 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS17505 | Not Available | Negative | 4169685 - 4170632 | 33760.8 |
| nadp-dependent oxidoreductase | CD58_RS17510 | Not Available | Negative | 4170648 - 4171568 | 31910.1 |
| ester cyclase | CD58_RS17515 | Not Available | Negative | 4171589 - 4172029 | 16104.2 |
| lysr family transcriptional regulator | CD58_RS17520 | Not Available | Positive | 4172121 - 4173032 | 32819.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
