Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CD58_RS17425 | Not Available | Positive | 4152504 - 4153850 | 46215.8 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | CD58_RS17430 | Not Available | Positive | 4154054 - 4154863 | 28628.5 |
| hypothetical protein | CD58_RS17435 | Not Available | Negative | 4155075 - 4155530 | 16559.8 |
| sdr family oxidoreductase | CD58_RS17440 | Not Available | Negative | 4155904 - 4156659 | 27000.4 |
| arac family transcriptional regulator | CD58_RS17445 | Not Available | Positive | 4156759 - 4157667 | 33110.3 |
| lysr family transcriptional regulator | CD58_RS17450 | Not Available | Negative | 4157720 - 4158613 | 32402.2 |
| gfa family protein | CD58_RS17455 | Not Available | Positive | 4158735 - 4159178 | 16112.1 |
| hypothetical protein | CD58_RS17460 | Not Available | Negative | 4159301 - 4159768 | 17303.3 |
| duf4253 domain-containing protein | CD58_RS17465 | Not Available | Negative | 4159903 - 4160685 | 28752.7 |
| 4-hydroxy-2-oxoheptanedioate aldolase | CD58_RS17470 | Not Available | Negative | 4160970 - 4161770 | 27581.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
