Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fdhf/ydep family oxidoreductase | CD58_RS01305 | Not Available | Negative | 306950 - 309298 | 86290.4 |
| formate dehydrogenase accessory sulfurtransferase fdhd | CD58_RS01310 | Not Available | Negative | 309295 - 310134 | 29783.7 |
| lysr family transcriptional regulator | CD58_RS01315 | Not Available | Negative | 310228 - 311115 | 32970.0 |
| peptidoglycan-binding protein lysm | CD58_RS01320 | Not Available | Positive | 311250 - 311690 | 15548.7 |
| gmp/imp nucleotidase | CD58_RS01325 | Not Available | Negative | 311802 - 312464 | 25489.4 |
| adp compounds hydrolase nude | CD58_RS01330 | Not Available | Positive | 312553 - 313119 | 20819.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | CD58_RS01335 | Not Available | Positive | 313116 - 313943 | 29528.2 |
| yiid c-terminal domain-containing protein | CD58_RS01340 | Not Available | Negative | 314066 - 314521 | 17171.7 |
| sigma-54-dependent transcriptional regulator | CD58_RS01345 | Not Available | Negative | 314559 - 315950 | 50677.9 |
| atp-binding protein | CD58_RS01350 | Not Available | Negative | 315947 - 317755 | 66857.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
