Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CD58_RS17375 | Not Available | Negative | 4117329 - 4118369 | 35498.4 |
| sugar abc transporter atp-binding protein | CD58_RS17380 | Not Available | Negative | 4118366 - 4119910 | 56369.4 |
| hypothetical protein | CD58_RS17385 | Not Available | Negative | 4119977 - 4120195 | 7854.53 |
| creatininase family protein | CD58_RS17390 | Not Available | Negative | 4120407 - 4121156 | 27314.5 |
| mfs transporter | CD58_RS17395 | Not Available | Negative | 4121208 - 4122533 | 48174.2 |
| metal abc transporter atp-binding protein | CD58_RS17400 | Not Available | Positive | 4122666 - 4123615 | 35825.2 |
| hypothetical protein | CD58_RS17405 | Not Available | Positive | 4123798 - 4124493 | 26279.6 |
| non-ribosomal peptide synthetase | CD58_RS17415 | Not Available | Positive | 4125142 - 4134705 | 350167.0 |
| non-ribosomal peptide synthetase | CD58_RS31470 | Not Available | Positive | 4134702 - 4147256 | 455492.0 |
| non-ribosomal peptide synthetase | CD58_RS29350 | Not Available | Positive | 4147178 - 4152514 | 194999.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
