Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 2 | CD58_RS17325 | Not Available | Positive | 4106360 - 4107277 | 35966.9 |
| paai family thioesterase | CD58_RS17330 | Not Available | Negative | 4107715 - 4108158 | 15671.9 |
| mfs transporter | CD58_RS17335 | Not Available | Positive | 4108579 - 4109877 | 46078.4 |
| n,n-dimethylformamidase beta subunit family domain-containing protein | CD58_RS17340 | Not Available | Positive | 4109889 - 4111562 | 61088.5 |
| arac family transcriptional regulator | CD58_RS17345 | Not Available | Negative | 4111620 - 4112597 | 34907.0 |
| mfs transporter | CD58_RS17350 | Not Available | Positive | 4112699 - 4113946 | 42712.0 |
| l-rhamnose mutarotase | CD58_RS17355 | Not Available | Negative | 4114064 - 4114420 | 13732.6 |
| amidohydrolase family protein | CD58_RS17360 | Not Available | Negative | 4114417 - 4115316 | 33516.0 |
| aldo/keto reductase | CD58_RS17365 | Not Available | Negative | 4115313 - 4116329 | 37291.4 |
| abc transporter substrate-binding protein | CD58_RS17370 | Not Available | Negative | 4116349 - 4117293 | 32989.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
