Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ester cyclase | CD58_RS17275 | Not Available | Positive | 4098127 - 4098522 | 14774.6 |
| fusc family protein | CD58_RS29345 | Not Available | Negative | 4098501 - 4099145 | 23308.5 |
| metal abc transporter atp-binding protein | CD58_RS17285 | Not Available | Positive | 4099142 - 4099444 | 11208.6 |
| mfs transporter | CD58_RS17290 | Not Available | Positive | 4099532 - 4100782 | 44079.7 |
| hypothetical protein | CD58_RS17295 | Not Available | Negative | 4100937 - 4101569 | 23913.7 |
| hypothetical protein | CD58_RS17300 | Not Available | Negative | 4101569 - 4102267 | 26473.9 |
| phosphate abc transporter atp-binding protein pstb | CD58_RS17305 | Not Available | Negative | 4102361 - 4103122 | 28232.2 |
| phosphate abc transporter permease psta | CD58_RS17310 | Not Available | Negative | 4103198 - 4104109 | 31914.2 |
| phosphate abc transporter permease subunit pstc | CD58_RS17315 | Not Available | Negative | 4104109 - 4105074 | 34202.1 |
| phosphate abc transporter substrate-binding protein psts | CD58_RS17320 | Not Available | Negative | 4105146 - 4106174 | 36723.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
