Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS17225 | Not Available | Positive | 4088999 - 4089475 | 17158.6 |
| tripartite tricarboxylate transporter permease | CD58_RS17230 | Not Available | Positive | 4089472 - 4090860 | 48705.2 |
| aromatic alcohol reductase | CD58_RS17235 | Not Available | Negative | 4091006 - 4091947 | 34831.8 |
| winged helix-turn-helix transcriptional regulator | CD58_RS17240 | Not Available | Positive | 4092044 - 4092502 | 17286.8 |
| diguanylate cyclase | CD58_RS17245 | Not Available | Positive | 4092643 - 4094325 | 61698.7 |
| type i methionyl aminopeptidase | CD58_RS17250 | Not Available | Negative | 4094415 - 4095221 | 29076.1 |
| pard-like family protein | CD58_RS17255 | Not Available | Negative | 4095224 - 4095430 | 7657.31 |
| organic hydroperoxide resistance protein | CD58_RS17260 | Not Available | Positive | 4095735 - 4096154 | 14116.7 |
| alpha/beta fold hydrolase | CD58_RS17265 | Not Available | Positive | 4096230 - 4097000 | 26589.8 |
| alpha/beta fold hydrolase | CD58_RS17270 | Not Available | Negative | 4097088 - 4097951 | 32227.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
